Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PCPG rs72640857 chr8:53839067 T/A 0.000414 174 24.47 27.2 6.1 KM Plot
PCPG rs72640860 chr8:53840500 G/A 0.000414 174 24.47 27.2 6.1 KM Plot
PCPG rs72640863 chr8:53841706 A/T 0.000414 174 24.47 27.2 6.1 KM Plot
PCPG rs72640865 chr8:53842471 C/T 5.03E-5 172 24.47 27.27 20 KM Plot
PCPG rs72640866 chr8:53843014 C/T 0.000433 173 24.47 27.27 6.1 KM Plot
PCPG rs72640868 chr8:53843812 C/A 0.000433 173 24.47 27.27 6.1 KM Plot
PCPG rs72643574 chr8:53844501 G/C 0.000433 173 24.47 27.27 6.1 KM Plot
PCPG rs72643576 chr8:53845016 A/T 5.03E-5 172 24.47 27.27 20 KM Plot
PCPG rs72643577 chr8:53846358 A/T 0.000471 172 24.47 27.2 6.1 KM Plot
PCPG rs72643579 chr8:53846705 C/A 0.000471 172 24.47 27.2 6.1 KM Plot
PCPG rs72643580 chr8:53846710 T/G 0.000471 172 24.47 27.2 6.1 KM Plot
PCPG rs72643583 chr8:53847269 C/G 0.000471 172 24.47 27.2 6.1 KM Plot
PCPG rs72643586 chr8:53847859 A/T 0.000471 172 24.47 27.2 6.1 KM Plot
PCPG rs72643588 chr8:53849335 C/T 5.59E-5 171 24.47 27.2 20 KM Plot
PCPG rs72643590 chr8:53849595 A/G 0.000471 172 24.47 27.2 6.1 KM Plot